Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-548o in B-CLL Leukemia Haslinger Cluster 55 Table contains all genes in the B-CLL Leukemia Haslinger cluster number 55. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548o 11217 AKAP2 A kinase (PRKA) anchor protein 2 [Source:HGNC Symbol;Acc:372] P T 1975 EIF4B eukaryotic translation initiation factor 4B [Source:HGNC Symbol;Acc:3285] T 51622 C7orf28B chromosome 7 open reading frame 28B [Source:HGNC Symbol;Acc:21717] zzz999 7707 ZNF148 zinc finger protein 148 [Source:HGNC Symbol;Acc:12933] P 22858 ICK intestinal cell (MAK-like) kinase [Source:HGNC Symbol;Acc:21219] zzz999 9917 FAM20B family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] zzz999 27097 TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa [Source:HGNC Symbol;Acc:17304] zzz999 128 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:253] zzz999 382 ARF6 ADP-ribosylation factor 6 [Source:HGNC Symbol;Acc:659] P T 8030 CCDC6 coiled-coil domain containing 6 [Source:HGNC Symbol;Acc:18782] zzz999 23112 TNRC6B trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190] P T 987 LRBA LPS-responsive vesicle trafficking, beach and anchor containing [Source:HGNC Symbol;Acc:1742] zzz999 6717 SRI sorcin [Source:HGNC Symbol;Acc:11292] P T 8454 CUL1 cullin 1 [Source:HGNC Symbol;Acc:2551] zzz999 91647 ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:18802] zzz999 25972 UNC50 unc-50 homolog (C. elegans) [Source:HGNC Symbol;Acc:16046] zzz999 23098 SARM1 sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:17074] zzz999 8148 TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa [Source:HGNC Symbol;Acc:11547] P 54434 SSH1 slingshot homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:30579] zzz999 4076 CAPRIN1 cell cycle associated protein 1 [Source:HGNC Symbol;Acc:6743] P 7468 WHSC1 Wolf-Hirschhorn syndrome candidate 1 [Source:HGNC Symbol;Acc:12766] P T 8621 CDK13 cyclin-dependent kinase 13 [Source:HGNC Symbol;Acc:1733] zzz999 9522 zzz999 zzz999 P 23424 TDRD7 tudor domain containing 7 [Source:HGNC Symbol;Acc:30831] P T 11335 CBX3 chromobox homolog 3 [Source:HGNC Symbol;Acc:1553] T 57185 NIPAL3 NIPA-like domain containing 3 [Source:HGNC Symbol;Acc:25233] zzz999 22796 COG2 component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:6546] zzz999 10914 PAPOLA poly(A) polymerase alpha [Source:HGNC Symbol;Acc:14981] P T 9857 CEP350 centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238] zzz999 8658 TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase [Source:HGNC Symbol;Acc:11941] T 55109 AGGF1 angiogenic factor with G patch and FHA domains 1 [Source:HGNC Symbol;Acc:24684] P 9939 RBM8A RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905] zzz999 7922 SLC39A7 solute carrier family 39 (zinc transporter), member 7 [Source:HGNC Symbol;Acc:4927] zzz999 60682 SMAP1 small ArfGAP 1 [Source:HGNC Symbol;Acc:19651] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.